Coding

Part:BBa_K187021:Design

Designed by: Team Biobytes   Group: iGEM09_Alberta   (2009-10-17)


Kanamycin resistance gene in pBA, BioBytes plasmid


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 10
    Illegal PstI site found at 193
    Illegal PstI site found at 811
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal PstI site found at 193
    Illegal PstI site found at 811
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 10
    Illegal PstI site found at 193
    Illegal PstI site found at 811
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 10
    Illegal PstI site found at 193
    Illegal PstI site found at 811
    Illegal NgoMIV site found at 644
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 493
    Illegal SapI.rc site found at 703


Design Notes

This plasmid includes only the open reading frame (start codon to stop codon) of the kan resistance gene. A promoter and terminator are not included. pAB and pBA do include an RBS consensus sequence positioned 8 bp upstream of the ATG. We recommend that to express kan resistance, you use the Biobytes assembly method together with the promoter and terminator parts we have submited in pAB and pBA to assemble promoters and terminators onto the kan resistance gene. As there is a range of promoters to chose from, this allows rapid manipulation of gene expression level. Using the Biobytes method, several DNA segments can be combined in just 20min per segment.


Source

The kanamycin resistance gene was cloned out of the plasmid pKD4. Biobytes plasmid pBA is entered as BBa_K187001.

References